bedops-2.4.39

BEDOPS is an open-source command-line toolkit that performs highly efficient and scalable Boolean and other set operations, statistical calculations, archiving, conversion and other management of genomic data of arbitrary scale.

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FROM ubuntu:18.04

RUN apt-get update \
    && apt-get install -y \
        wget \
    && rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*

WORKDIR /opt

RUN wget https://github.com/bedops/bedops/releases/download/v2.4.39/bedops_linux_x86_64-v2.4.39.tar.bz2 -O bedops_linux_x86_64-v2.4.39.tar.bz2 \
    && tar jxvf bedops_linux_x86_64-v2.4.39.tar.bz2 \
    && rm bedops_linux_x86_64-v2.4.39.tar.bz2

# Make all BEDOPS executables global
RUN ln -s /opt/bin/* /usr/local/bin/

biodockerfiles

bedops-2.4.39